[packages/R-gcrma] Rel 2

arekm arekm at pld-linux.org
Sun Apr 5 20:08:53 CEST 2026


commit 8e350f540c357a9aa5eb54da158743f9b55b185b
Author: Arkadiusz Miśkiewicz <arekm at maven.pl>
Date:   Sun Apr 5 20:08:41 2026 +0200

    Rel 2

 R-gcrma.spec     |  4 +---
 bogus-deps.patch | 22 ----------------------
 2 files changed, 1 insertion(+), 25 deletions(-)
---
diff --git a/R-gcrma.spec b/R-gcrma.spec
index c326144..9cdb889 100644
--- a/R-gcrma.spec
+++ b/R-gcrma.spec
@@ -3,12 +3,11 @@
 Summary:	Background Adjustment Using Sequence Information
 Name:		R-%{packname}
 Version:	2.82.0
-Release:	1
+Release:	2
 License:	LGPL
 Group:		Applications/Engineering
 Source0:	https://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
 # Source0-md5:	98e65da32e8843dc3c1eed09551920c2
-Patch0:		bogus-deps.patch
 URL:		https://bioconductor.org/packages/release/bioc/html/gcrma.html
 BuildRequires:	R
 BuildRequires:	R-affy
@@ -32,7 +31,6 @@ Background adjustment using sequence information.
 
 %prep
 %setup -q -c -n %{packname}
-%patch -P0 -p1
 
 %build
 
diff --git a/bogus-deps.patch b/bogus-deps.patch
deleted file mode 100644
index 223625f..0000000
--- a/bogus-deps.patch
+++ /dev/null
@@ -1,22 +0,0 @@
---- gcrma/gcrma/DESCRIPTION~	2012-10-02 04:44:17.000000000 +0200
-+++ gcrma/gcrma/DESCRIPTION	2012-10-17 19:26:58.529249639 +0200
-@@ -11,7 +11,7 @@
- Depends: R (>= 2.6.0), affy (>= 1.23.2), graphics, methods, stats,
-         utils
- Imports: Biobase, affy (>= 1.23.2), affyio (>= 1.13.3), XVector,
--        Biostrings (>= 2.11.32), splines, BiocInstaller
-+        Biostrings (>= 2.11.32), splines
- Suggests: affydata, tools, splines, hgu95av2cdf, hgu95av2probe
- biocViews: Microarray, OneChannel, Preprocessing
- Packaged: 2012-10-02 02:44:17 UTC; biocbuild
---- gcrma/gcrma/NAMESPACE~	2012-10-02 00:58:42.000000000 +0200
-+++ gcrma/gcrma/NAMESPACE	2012-10-17 19:27:09.325915925 +0200
-@@ -12,8 +12,6 @@
- 
- importFrom(Biobase, testBioCConnection)
- 
--importFrom(BiocInstaller, biocinstallRepos)
--
- importFrom(XVector, subseq, "subseq<-")
- importClassesFrom(Biostrings, "DNAStringSet")
- importFrom(Biostrings, DNAStringSet, complement)
================================================================

---- gitweb:

http://git.pld-linux.org/gitweb.cgi/packages/R-gcrma.git/commitdiff/8e350f540c357a9aa5eb54da158743f9b55b185b



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