[packages/R-gcrma] Rel 2
arekm
arekm at pld-linux.org
Sun Apr 5 20:08:53 CEST 2026
commit 8e350f540c357a9aa5eb54da158743f9b55b185b
Author: Arkadiusz Miśkiewicz <arekm at maven.pl>
Date: Sun Apr 5 20:08:41 2026 +0200
Rel 2
R-gcrma.spec | 4 +---
bogus-deps.patch | 22 ----------------------
2 files changed, 1 insertion(+), 25 deletions(-)
---
diff --git a/R-gcrma.spec b/R-gcrma.spec
index c326144..9cdb889 100644
--- a/R-gcrma.spec
+++ b/R-gcrma.spec
@@ -3,12 +3,11 @@
Summary: Background Adjustment Using Sequence Information
Name: R-%{packname}
Version: 2.82.0
-Release: 1
+Release: 2
License: LGPL
Group: Applications/Engineering
Source0: https://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
# Source0-md5: 98e65da32e8843dc3c1eed09551920c2
-Patch0: bogus-deps.patch
URL: https://bioconductor.org/packages/release/bioc/html/gcrma.html
BuildRequires: R
BuildRequires: R-affy
@@ -32,7 +31,6 @@ Background adjustment using sequence information.
%prep
%setup -q -c -n %{packname}
-%patch -P0 -p1
%build
diff --git a/bogus-deps.patch b/bogus-deps.patch
deleted file mode 100644
index 223625f..0000000
--- a/bogus-deps.patch
+++ /dev/null
@@ -1,22 +0,0 @@
---- gcrma/gcrma/DESCRIPTION~ 2012-10-02 04:44:17.000000000 +0200
-+++ gcrma/gcrma/DESCRIPTION 2012-10-17 19:26:58.529249639 +0200
-@@ -11,7 +11,7 @@
- Depends: R (>= 2.6.0), affy (>= 1.23.2), graphics, methods, stats,
- utils
- Imports: Biobase, affy (>= 1.23.2), affyio (>= 1.13.3), XVector,
-- Biostrings (>= 2.11.32), splines, BiocInstaller
-+ Biostrings (>= 2.11.32), splines
- Suggests: affydata, tools, splines, hgu95av2cdf, hgu95av2probe
- biocViews: Microarray, OneChannel, Preprocessing
- Packaged: 2012-10-02 02:44:17 UTC; biocbuild
---- gcrma/gcrma/NAMESPACE~ 2012-10-02 00:58:42.000000000 +0200
-+++ gcrma/gcrma/NAMESPACE 2012-10-17 19:27:09.325915925 +0200
-@@ -12,8 +12,6 @@
-
- importFrom(Biobase, testBioCConnection)
-
--importFrom(BiocInstaller, biocinstallRepos)
--
- importFrom(XVector, subseq, "subseq<-")
- importClassesFrom(Biostrings, "DNAStringSet")
- importFrom(Biostrings, DNAStringSet, complement)
================================================================
---- gitweb:
http://git.pld-linux.org/gitweb.cgi/packages/R-gcrma.git/commitdiff/8e350f540c357a9aa5eb54da158743f9b55b185b
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