[packages/R-gcrma] - up to 2.34.0

[baggins]

commit a198121391d6303d9309755aa8344038e65f6c73
Author: Jan Rękorajski <baggins at pld-linux.org>
Date:   Tue Nov 26 13:29:11 2013 +0100

    - up to 2.34.0

 R-gcrma.spec     | 6 ++++--
 bogus-deps.patch | 4 ++--
 2 files changed, 6 insertions(+), 4 deletions(-)
---
diff --git a/R-gcrma.spec b/R-gcrma.spec
index 3ad56e3..b47ffe9 100644
--- a/R-gcrma.spec
+++ b/R-gcrma.spec
@@ -2,20 +2,22 @@
 
 Summary:	Background Adjustment Using Sequence Information
 Name:		R-%{packname}
-Version:	2.30.0
+Version:	2.34.0
 Release:	1
 License:	LGPL
 Group:		Applications/Engineering
 Source0:	http://www.bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
-# Source0-md5:	13a24a8182b435d538fc0abb67e47ebd
+# Source0-md5:	44f0435123c2a962914dc6737d6881c2
 Patch0:		bogus-deps.patch
 URL:		http://www.bioconductor.org/packages/release/bioc/html/gcrma.html
 BuildRequires:	R-Biobase >= 2.5.5
 BuildRequires:	R
+BuildRequires:	R-XVector-devel
 BuildRequires:	texlive-latex
 BuildRequires:	texinfo
 Requires:	R-Biobase >= 2.5.5
 Requires:	R
+Requires:	R-XVector
 Requires:	texinfo
 BuildRoot:	%{tmpdir}/%{name}-%{version}-root-%(id -u -n)
 
diff --git a/bogus-deps.patch b/bogus-deps.patch
index 78bfb24..223625f 100644
--- a/bogus-deps.patch
+++ b/bogus-deps.patch
@@ -3,7 +3,7 @@
 @@ -11,7 +11,7 @@
  Depends: R (>= 2.6.0), affy (>= 1.23.2), graphics, methods, stats,
          utils
- Imports: Biobase, affy (>= 1.23.2), affyio (>= 1.13.3), IRanges,
+ Imports: Biobase, affy (>= 1.23.2), affyio (>= 1.13.3), XVector,
 -        Biostrings (>= 2.11.32), splines, BiocInstaller
 +        Biostrings (>= 2.11.32), splines
  Suggests: affydata, tools, splines, hgu95av2cdf, hgu95av2probe
@@ -17,6 +17,6 @@
  
 -importFrom(BiocInstaller, biocinstallRepos)
 -
- importFrom(IRanges, subseq, "subseq<-")
+ importFrom(XVector, subseq, "subseq<-")
  importClassesFrom(Biostrings, "DNAStringSet")
  importFrom(Biostrings, DNAStringSet, complement)
================================================================

---- gitweb:

http://git.pld-linux.org/gitweb.cgi/packages/R-gcrma.git/commitdiff/a198121391d6303d9309755aa8344038e65f6c73