[packages/R-cummeRbund] - new

[baggins]

commit b8659c1c03f0ca98aaa355c0097d6215bf4abaaf
Author: Jan Rękorajski <baggins at pld-linux.org>
Date:   Fri Nov 29 13:16:43 2013 +0100

    - new

 R-cummeRbund.spec | 66 +++++++++++++++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 66 insertions(+)
---
diff --git a/R-cummeRbund.spec b/R-cummeRbund.spec
new file mode 100644
index 0000000..91f8589
--- /dev/null
+++ b/R-cummeRbund.spec
@@ -0,0 +1,66 @@
+%define		packname	cummeRbund
+
+Summary:	Analysis, exploration, manipulation, and visualization of Cufflinks high-throughput sequencing data
+Name:		R-%{packname}
+Version:	2.4.0
+Release:	1
+License:	LGPL v2+
+Group:		Applications/Engineering
+Source0:	http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
+# Source0-md5:	f6236638b8305fd6ac7c58bd5f9bb89d
+URL:		http://bioconductor.org/packages/release/bioc/html/cummeRbund.html
+BuildRequires:	R
+BuildRequires:	R-BiocGenerics >= 0.3.2
+BuildRequires:	R-Gviz
+BuildRequires:	R-cran-fastcluster
+BuildRequires:	R-cran-ggplot2
+BuildRequires:	R-cran-plyr
+BuildRequires:	R-cran-reshape2
+BuildRequires:	R-cran-RSQLite
+BuildRequires:	R-rtracklayer
+BuildRequires:	texlive-latex
+Requires:	R
+Requires:	R-BiocGenerics >= 0.3.2
+Requires:	R-Gviz
+Requires:	R-cran-fastcluster
+Requires:	R-cran-ggplot2
+Requires:	R-cran-plyr
+Requires:	R-cran-reshape2
+Requires:	R-cran-RSQLite
+Requires:	R-rtracklayer
+BuildRoot:	%{tmpdir}/%{name}-%{version}-root-%(id -u -n)
+
+%description
+Allows for persistent storage, access, exploration, and manipulation
+of Cufflinks high-throughput sequencing data. In addition, provides
+numerous plotting functions for commonly used visualizations.
+
+%prep
+%setup -q -c -n %{packname}
+
+%build
+
+%install
+rm -rf $RPM_BUILD_ROOT
+install -d $RPM_BUILD_ROOT%{_libdir}/R/library
+
+R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library
+
+%clean
+rm -rf $RPM_BUILD_ROOT
+
+%files
+%defattr(644,root,root,755)
+%dir %{_libdir}/R/library/%{packname}
+%doc %{_libdir}/R/library/%{packname}/doc
+%doc %{_libdir}/R/library/%{packname}/html
+%doc %{_libdir}/R/library/%{packname}/DESCRIPTION
+%doc %{_libdir}/R/library/%{packname}/NEWS
+%{_libdir}/R/library/%{packname}/INDEX
+%{_libdir}/R/library/%{packname}/NAMESPACE
+%{_libdir}/R/library/%{packname}/Meta
+%{_libdir}/R/library/%{packname}/R
+%{_libdir}/R/library/%{packname}/help
+%{_libdir}/R/library/%{packname}/data
+%{_libdir}/R/library/%{packname}/extdata
+%{_libdir}/R/library/%{packname}/reports
================================================================

---- gitweb:

http://git.pld-linux.org/gitweb.cgi/packages/R-cummeRbund.git/commitdiff/b8659c1c03f0ca98aaa355c0097d6215bf4abaaf