[packages/lal-apps] - new
qboosh
qboosh at pld-linux.org
Sun Feb 19 07:50:56 CET 2023
commit 1a63f86500644bcd456559faa476231dda9dcef5
Author: Jakub Bogusz <qboosh at pld-linux.org>
Date: Sun Feb 19 07:52:27 2023 +0100
- new
lal-apps-env.patch | 10 +++
lal-apps.spec | 237 +++++++++++++++++++++++++++++++++++++++++++++++++++++
2 files changed, 247 insertions(+)
---
diff --git a/lal-apps.spec b/lal-apps.spec
new file mode 100644
index 0000000..4bb075d
--- /dev/null
+++ b/lal-apps.spec
@@ -0,0 +1,237 @@
+# TODO: CUDA (on bcond)
+Summary: LAL Applications
+Summary(pl.UTF-8): Aplikacje LAL
+Name: lal-apps
+Version: 9.1.0
+Release: 1
+License: GPL v2+
+Group: Libraries
+Source0: http://software.igwn.org/lscsoft/source/lalsuite/lalapps-%{version}.tar.xz
+# Source0-md5: c6902a229427dad3feb4f2011798d3a8
+Patch0: %{name}-env.patch
+URL: https://wiki.ligo.org/Computing/LALSuite
+BuildRequires: autoconf >= 2.63
+BuildRequires: automake >= 1:1.11
+BuildRequires: cfitsio-devel
+BuildRequires: fftw3-devel >= 3
+BuildRequires: fftw3-single-devel >= 3
+BuildRequires: gsl-devel >= 1.13
+BuildRequires: help2man
+BuildRequires: lal-devel >= 7.2.2
+BuildRequires: lal-burst-devel >= 1.7.0
+BuildRequires: lal-frame-devel >= 2.0.0
+BuildRequires: lal-inference-devel >= 4.1.0
+BuildRequires: lal-inspiral-devel >= 3.0.0
+BuildRequires: lal-metaio-devel >= 3.0.0
+BuildRequires: lal-pulsar-devel >= 5.2.0
+BuildRequires: lal-simulation-devel >= 4.0.0
+BuildRequires: libframe-devel >= 8.39.2
+BuildRequires: libstdc++-devel
+BuildRequires: libtool >= 2:2
+BuildRequires: octave-devel >= 1:3.2.0
+BuildRequires: pkgconfig
+BuildRequires: python3-devel >= 1:3.5
+BuildRequires: tar >= 1:1.22
+BuildRequires: xz
+BuildRequires: zlib-devel
+Requires: gsl >= 1.13
+Requires: lal >= 7.2.2
+Requires: lal-burst >= 1.7.0
+Requires: lal-frame >= 2.0.0
+Requires: lal-inference >= 4.1.0
+Requires: lal-inspiral >= 3.0.0
+Requires: lal-metaio >= 3.0.0
+Requires: lal-pulsar >= 5.2.0
+Requires: lal-simulation >= 4.0.0
+Requires: libframe >= 8.39.2
+BuildRoot: %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
+
+%description
+Collection of gravitational wave data analysis codes and pipelines
+utilising the LAL libraries.
+
+%description -l pl.UTF-8
+Zbiór programów i potoków do analizy fal grawitacyjnych przy użyciu
+bibliotek LAL.
+
+%package -n python3-lalapps
+Summary: Python LAL Apps library
+Summary(pl.UTF-8): Biblioteka LAL Apps dla Pythona
+Group: Libraries/Python
+Requires: python3-lal >= 7.2.2
+Requires: python3-lalburst >= 1.7.0
+Requires: python3-lalpulsar >= 5.2.0
+Requires: python3-ligo-lw >= 1.7.0
+Requires: python3-ligo-segments
+Requires: python3-lscsoft-glue
+Requires: python3-modules >= 1:3.5
+
+%description -n python3-lalapps
+Python LAL Apps library.
+
+%description -n python3-lalapps -l pl.UTF-8
+Biblioteka LAL Apps dla Pythona
+
+%prep
+%setup -q -n lalapps-%{version}
+%patch0 -p1
+
+%build
+%{__libtoolize}
+%{__aclocal} -I gnuscripts
+%{__autoconf}
+%{__autoheader}
+%{__automake}
+%configure \
+ --disable-silent-rules \
+
+%{__make}
+
+%install
+rm -rf $RPM_BUILD_ROOT
+
+%{__make} install \
+ DESTDIR=$RPM_BUILD_ROOT
+
+install -d $RPM_BUILD_ROOT/etc/shrc.d
+%{__mv} $RPM_BUILD_ROOT%{_sysconfdir}/*sh $RPM_BUILD_ROOT/etc/shrc.d
+
+%clean
+rm -rf $RPM_BUILD_ROOT
+
+%files
+%defattr(644,root,root,755)
+%doc AUTHORS README.md
+%attr(755,root,root) %{_bindir}/lalapps_DistanceVsMass
+%attr(755,root,root) %{_bindir}/lalapps_StringAddFrame
+%attr(755,root,root) %{_bindir}/lalapps_StringSearch
+%attr(755,root,root) %{_bindir}/lalapps_animate
+%attr(755,root,root) %{_bindir}/lalapps_binj
+%attr(755,root,root) %{_bindir}/lalapps_blindinj
+%attr(755,root,root) %{_bindir}/lalapps_calcexpsnr
+%attr(755,root,root) %{_bindir}/lalapps_calfacs
+%attr(755,root,root) %{_bindir}/lalapps_cbc_stochasticbank
+%attr(755,root,root) %{_bindir}/lalapps_chirplen
+%attr(755,root,root) %{_bindir}/lalapps_coh_PTF_inspiral
+%attr(755,root,root) %{_bindir}/lalapps_coinj
+%attr(755,root,root) %{_bindir}/lalapps_effdist
+%attr(755,root,root) %{_bindir}/lalapps_exc_resp
+%attr(755,root,root) %{_bindir}/lalapps_fr_ninja
+%attr(755,root,root) %{_bindir}/lalapps_frextr
+%attr(755,root,root) %{_bindir}/lalapps_frinfo
+%attr(755,root,root) %{_bindir}/lalapps_frjoin
+%attr(755,root,root) %{_bindir}/lalapps_frread
+%attr(755,root,root) %{_bindir}/lalapps_frview
+%attr(755,root,root) %{_bindir}/lalapps_gwf2xml
+%attr(755,root,root) %{_bindir}/lalapps_inspawgfile
+%attr(755,root,root) %{_bindir}/lalapps_inspfrinj
+%attr(755,root,root) %{_bindir}/lalapps_inspinj
+%attr(755,root,root) %{_bindir}/lalapps_inspiralDistance
+%attr(755,root,root) %{_bindir}/lalapps_makeblindinj
+%attr(755,root,root) %{_bindir}/lalapps_makeblindinj_himass
+%attr(755,root,root) %{_bindir}/lalapps_ninja
+%attr(755,root,root) %{_bindir}/lalapps_power
+%attr(755,root,root) %{_bindir}/lalapps_random_bank
+%attr(755,root,root) %{_bindir}/lalapps_randombank
+%attr(755,root,root) %{_bindir}/lalapps_spininj
+%attr(755,root,root) %{_bindir}/lalapps_splitbank
+%attr(755,root,root) %{_bindir}/lalapps_tmpltbank
+%attr(755,root,root) %{_bindir}/lalapps_version
+%attr(755,root,root) %{_bindir}/lalapps_xtefitstoframe
+# wrappers for lal tools
+%attr(755,root,root) %{_bindir}/lalapps_cache
+%attr(755,root,root) %{_bindir}/lalapps_fftw_wisdom
+%attr(755,root,root) %{_bindir}/lalapps_fftwf_wisdom
+%attr(755,root,root) %{_bindir}/lalapps_tconvert
+# wrappers for lalpulsar tools
+%attr(755,root,root) %{_bindir}/lalapps_ComputeAntennaPattern
+%attr(755,root,root) %{_bindir}/lalapps_ComputeFstatBenchmark
+%attr(755,root,root) %{_bindir}/lalapps_ComputeFstatLatticeCount
+%attr(755,root,root) %{_bindir}/lalapps_ComputeFstatMCUpperLimit
+%attr(755,root,root) %{_bindir}/lalapps_ComputeFstatistic_v2
+%attr(755,root,root) %{_bindir}/lalapps_ComputePSD
+%attr(755,root,root) %{_bindir}/lalapps_CopySFTs
+%attr(755,root,root) %{_bindir}/lalapps_DriveHoughMulti
+%attr(755,root,root) %{_bindir}/lalapps_FstatMetric_v2
+%attr(755,root,root) %{_bindir}/lalapps_HierarchSearchGCT
+%attr(755,root,root) %{_bindir}/lalapps_HierarchicalSearch
+%attr(755,root,root) %{_bindir}/lalapps_MakeSFTs
+%attr(755,root,root) %{_bindir}/lalapps_Makefakedata_v4
+%attr(755,root,root) %{_bindir}/lalapps_Makefakedata_v5
+%attr(755,root,root) %{_bindir}/lalapps_PredictFstat
+%attr(755,root,root) %{_bindir}/lalapps_PrintDetectorState
+%attr(755,root,root) %{_bindir}/lalapps_SFTclean
+%attr(755,root,root) %{_bindir}/lalapps_SFTvalidate
+%attr(755,root,root) %{_bindir}/lalapps_Weave
+%attr(755,root,root) %{_bindir}/lalapps_WeaveCompare
+%attr(755,root,root) %{_bindir}/lalapps_WeaveConcat
+%attr(755,root,root) %{_bindir}/lalapps_WeaveSetup
+%attr(755,root,root) %{_bindir}/lalapps_WriteSFTsfromSFDBs
+%attr(755,root,root) %{_bindir}/lalapps_compareFstats
+%attr(755,root,root) %{_bindir}/lalapps_compareSFTs
+%attr(755,root,root) %{_bindir}/lalapps_create_solar_system_ephemeris
+%attr(755,root,root) %{_bindir}/lalapps_create_time_correction_ephemeris
+%attr(755,root,root) %{_bindir}/lalapps_dumpSFT
+%attr(755,root,root) %{_bindir}/lalapps_fits_header_getval
+%attr(755,root,root) %{_bindir}/lalapps_fits_header_list
+%attr(755,root,root) %{_bindir}/lalapps_fits_overview
+%attr(755,root,root) %{_bindir}/lalapps_fits_table_list
+%attr(755,root,root) %{_bindir}/lalapps_heterodyne_pulsar
+%attr(755,root,root) %{_bindir}/lalapps_pulsar_crosscorr_v2
+%attr(755,root,root) %{_bindir}/lalapps_pulsar_frequency_evolution
+%attr(755,root,root) %{_bindir}/lalapps_pulsar_parameter_estimation_nested
+%attr(755,root,root) %{_bindir}/lalapps_spec_avg
+%attr(755,root,root) %{_bindir}/lalapps_spec_avg_long
+%attr(755,root,root) %{_bindir}/lalapps_spec_coherence
+%attr(755,root,root) %{_bindir}/lalapps_splitSFTs
+%attr(755,root,root) %{_bindir}/lalapps_ssbtodetector
+%attr(755,root,root) %{_bindir}/lalapps_synthesizeBstatMC
+%attr(755,root,root) %{_bindir}/lalapps_synthesizeLVStats
+%attr(755,root,root) %{_bindir}/lalapps_synthesizeTransientStats
+%{_datadir}/lalapps
+/etc/shrc.d/lalapps-user-env.csh
+/etc/shrc.d/lalapps-user-env.fish
+/etc/shrc.d/lalapps-user-env.sh
+%{_mandir}/man1/lalapps_frextr.1*
+%{_mandir}/man1/lalapps_frinfo.1*
+%{_mandir}/man1/lalapps_frjoin.1*
+%{_mandir}/man1/lalapps_frread.1*
+%{_mandir}/man1/lalapps_hello.1*
+%{_mandir}/man1/lalapps_mkcalfac.1*
+%{_mandir}/man1/lalapps_mkcalref.1*
+%{_mandir}/man1/lalapps_power.1*
+%{_mandir}/man1/lalapps_ring.1*
+
+%files -n python3-lalapps
+%defattr(644,root,root,755)
+%attr(755,root,root) %{_bindir}/lalapps_cafe
+%attr(755,root,root) %{_bindir}/lalapps_cosmicstring_pipe
+%attr(755,root,root) %{_bindir}/lalapps_make_nr_hdf_catalog
+%attr(755,root,root) %{_bindir}/lalapps_power_likelihood_pipe
+%attr(755,root,root) %{_bindir}/lalapps_power_pipe
+%attr(755,root,root) %{_bindir}/lalapps_run_sqlite
+%attr(755,root,root) %{_bindir}/lalapps_string_apply_vetoes
+%attr(755,root,root) %{_bindir}/lalapps_string_calc_likelihood
+%attr(755,root,root) %{_bindir}/lalapps_string_contour_plotter
+%attr(755,root,root) %{_bindir}/lalapps_string_contour_plotter_largeloops
+%attr(755,root,root) %{_bindir}/lalapps_string_cs_gamma
+%attr(755,root,root) %{_bindir}/lalapps_string_cs_gamma_largeloops
+%attr(755,root,root) %{_bindir}/lalapps_string_final
+%attr(755,root,root) %{_bindir}/lalapps_string_meas_likelihood
+%attr(755,root,root) %{_bindir}/lalapps_string_plot_binj
+%attr(755,root,root) %{_bindir}/lalapps_string_plot_likelihood
+# wrappers for lal python tools
+%attr(755,root,root) %{_bindir}/lalapps_path2cache
+%attr(755,root,root) %{_bindir}/lalapps_searchsum2cache
+# wrappers for lalpulsar python tools
+%attr(755,root,root) %{_bindir}/lalapps_MakeSFTDAG
+%attr(755,root,root) %{_bindir}/lalapps_combine_crosscorr_toplists
+%attr(755,root,root) %{_bindir}/lalapps_create_solar_system_ephemeris_python
+%attr(755,root,root) %{_bindir}/lalapps_knope
+%attr(755,root,root) %{_bindir}/lalapps_knope_automation_script
+%attr(755,root,root) %{_bindir}/lalapps_knope_collate_results
+%attr(755,root,root) %{_bindir}/lalapps_knope_result_page
+%attr(755,root,root) %{_bindir}/lalapps_run_pulsar_crosscorr_v2
+%dir %{py3_sitedir}/lalapps
+%{py3_sitedir}/lalapps/*.py
+%{py3_sitedir}/lalapps/__pycache__
diff --git a/lal-apps-env.patch b/lal-apps-env.patch
new file mode 100644
index 0000000..1b6ad1a
--- /dev/null
+++ b/lal-apps-env.patch
@@ -0,0 +1,10 @@
+--- lalapps-9.1.0/Makefile.am.orig 2022-11-03 23:47:47.055846839 +0100
++++ lalapps-9.1.0/Makefile.am 2023-02-18 22:00:01.240663681 +0100
+@@ -21,7 +21,4 @@ SUBDIRS = \
+ user_environment = \
+ set $(PACKAGE)_PREFIX $(prefix); \
+ set $(PACKAGE)_DATADIR $(pkgdatadir); \
+- prepend MANPATH $(mandir); \
+- prepend PATH $(bindir); \
+- prepend PYTHONPATH $(pyexecdir) $(pythondir); \
+ $(END_OF_LIST)
================================================================
---- gitweb:
http://git.pld-linux.org/gitweb.cgi/packages/lal-apps.git/commitdiff/1a63f86500644bcd456559faa476231dda9dcef5
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